Sudo-JHare/FHIRFLARE-IG-Toolkit
Sudo-JHare/FHIRFLARE-IG-Toolkit
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Code Issues Packages Projects Releases 6 Wiki Activity

fix

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This commit is contained in:
Joshua Hare 2025-08-12 23:26:05 +10:00
parent 91fdaa89f9
commit 62ff8e8a28
1 changed files with 61 additions and 42 deletions
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99
templates/retrieve_split_data.html
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@ -27,7 +27,7 @@
</ul> </ul>
</div> </div>
{% endif %} {% endif %}
<form id="retrieveForm" method="POST"> <form id="retrieveForm" method="POST" enctype="multipart/form-data">
{{ form.hidden_tag() }} {{ form.hidden_tag() }}
<div class="mb-3"> <div class="mb-3">
<label class="form-label fw-bold">FHIR Server</label> <label class="form-label fw-bold">FHIR Server</label>
@ -181,7 +181,6 @@ document.addEventListener('DOMContentLoaded', () => {
let retrieveZipPath = null; let retrieveZipPath = null;
let splitZipPath = null; let splitZipPath = null;
let fetchedMetadataCache = null; let fetchedMetadataCache = null;
let eventSource = null;
// --- Helper Functions --- // --- Helper Functions ---
const sanitizeText = (str) => str ? String(str).replace(/</g, "&lt;").replace(/>/g, "&gt;") : ""; const sanitizeText = (str) => str ? String(str).replace(/</g, "&lt;").replace(/>/g, "&gt;") : "";
@ -301,10 +300,10 @@ document.addEventListener('DOMContentLoaded', () => {
fetchMetadataButton.textContent = 'Fetching...'; fetchMetadataButton.textContent = 'Fetching...';
try { try {
// Updated metadata fetch logic to handle both local and custom URLs const fetchUrl = '/fhir/metadata';
const fetchUrl = useLocalHapi ? '/fhir/metadata' : `${customUrl}/metadata`;
const headers = { 'Accept': 'application/fhir+json' }; const headers = { 'Accept': 'application/fhir+json' };
if (!useLocalHapi) { if (!useLocalHapi && customUrl) {
headers['X-Target-FHIR-Server'] = customUrl;
if (authTypeSelect && authTypeSelect.value !== 'none') { if (authTypeSelect && authTypeSelect.value !== 'none') {
const authType = authTypeSelect.value; const authType = authTypeSelect.value;
if (authType === 'bearer' && bearerTokenInput && bearerTokenInput.value) { if (authType === 'bearer' && bearerTokenInput && bearerTokenInput.value) {
@ -314,10 +313,12 @@ document.addEventListener('DOMContentLoaded', () => {
headers['Authorization'] = `Basic ${credentials}`; headers['Authorization'] = `Basic ${credentials}`;
} }
} }
console.log(`Fetching metadata directly from: ${customUrl}`); console.log(`Fetching metadata via proxy with X-Target-FHIR-Server: ${customUrl}`);
} else { } else {
console.log("Fetching metadata from local HAPI server via proxy"); console.log("Fetching metadata via proxy for local HAPI server");
} }
console.log(`Proxy Fetch URL: ${fetchUrl}`);
console.log(`Request Headers sent TO PROXY: ${JSON.stringify(headers)}`);
const response = await fetch(fetchUrl, { method: 'GET', headers: headers }); const response = await fetch(fetchUrl, { method: 'GET', headers: headers });
@ -382,7 +383,25 @@ document.addEventListener('DOMContentLoaded', () => {
return; return;
} }
const currentFhirServerUrl = useLocalHapi ? null : fhirServerUrlInput.value.trim().replace(/\/+$/, ''); const formData = new FormData();
const csrfTokenInput = retrieveForm.querySelector('input[name="csrf_token"]');
if (csrfTokenInput) formData.append('csrf_token', csrfTokenInput.value);
selectedResources.forEach(res => formData.append('resources', res));
if (validateReferencesCheckbox) {
formData.append('validate_references', validateReferencesCheckbox.checked ? 'true' : 'false');
}
if (fetchReferenceBundlesCheckbox) {
if (validateReferencesCheckbox && validateReferencesCheckbox.checked) {
formData.append('fetch_reference_bundles', fetchReferenceBundlesCheckbox.checked ? 'true' : 'false');
} else {
formData.append('fetch_reference_bundles', 'false');
}
} else {
formData.append('fetch_reference_bundles', 'false');
}
const currentFhirServerUrl = useLocalHapi ? '/fhir' : fhirServerUrlInput.value.trim();
if (!useLocalHapi && !currentFhirServerUrl) { if (!useLocalHapi && !currentFhirServerUrl) {
alert('Custom FHIR Server URL is required.'); alert('Custom FHIR Server URL is required.');
fhirServerUrlInput.classList.add('is-invalid'); fhirServerUrlInput.classList.add('is-invalid');
@ -391,45 +410,43 @@ document.addEventListener('DOMContentLoaded', () => {
if (icon) icon.style.display = 'inline-block'; if (icon) icon.style.display = 'inline-block';
return; return;
} }
formData.append('fhir_server_url', currentFhirServerUrl);
const authType = authTypeSelect?.value; // Add authentication fields for custom URL
const authHeader = (authType === 'bearer' && bearerTokenInput?.value) ? `Bearer ${bearerTokenInput.value}` if (!useLocalHapi && authTypeSelect) {
: (authType === 'basic' && usernameInput?.value && passwordInput?.value) ? `Basic ${btoa(`${usernameInput.value}:${passwordInput.value}`)}` const authType = authTypeSelect.value;
: null; formData.append('auth_type', authType);
if (authType === 'bearer' && bearerTokenInput) {
const validateReferences = validateReferencesCheckbox?.checked ? 'true' : 'false'; if (!bearerTokenInput.value) {
const fetchReferenceBundles = validateReferences === 'true' && fetchReferenceBundlesCheckbox?.checked ? 'true' : 'false'; alert('Please enter a Bearer Token.');
retrieveButton.disabled = false;
// --- Stream the logs directly from the server --- if (spinner) spinner.style.display = 'none';
const url = new URL('/api/stream-retrieve', window.location.origin); if (icon) icon.style.display = 'inline-block';
return;
// Use POST for the new endpoint }
const formData = { formData.append('bearer_token', bearerTokenInput.value);
fhir_server_url: currentFhirServerUrl, } else if (authType === 'basic' && usernameInput && passwordInput) {
resources: selectedResources, if (!usernameInput.value || !passwordInput.value) {
validate_references: validateReferences, alert('Please enter both Username and Password for Basic Authentication.');
fetch_reference_bundles: fetchReferenceBundles retrieveButton.disabled = false;
}; if (spinner) spinner.style.display = 'none';
if (icon) icon.style.display = 'inline-block';
return;
}
formData.append('username', usernameInput.value);
formData.append('password', passwordInput.value);
}
}
const headers = { const headers = {
'Content-Type': 'application/json',
'Accept': 'application/x-ndjson', 'Accept': 'application/x-ndjson',
'X-CSRFToken': csrfTokenInput ? csrfTokenInput.value : '',
'X-API-Key': apiKey
}; };
if (authHeader) { console.log(`Submitting retrieve request. Server: ${currentFhirServerUrl}, ValidateRefs: ${formData.get('validate_references')}, FetchRefBundles: ${formData.get('fetch_reference_bundles')}, AuthType: ${formData.get('auth_type')}`);
headers['Authorization'] = authHeader;
}
const csrfTokenInput = retrieveForm.querySelector('input[name="csrf_token"]');
if (csrfTokenInput) {
headers['X-CSRFToken'] = csrfTokenInput.value;
}
if (apiKey) {
headers['X-API-Key'] = apiKey;
}
console.log(`Submitting retrieve request. URL: ${url.toString()}, Headers: ${JSON.stringify(headers)}, Body: ${JSON.stringify(formData)}`);
try { try {
const response = await fetch(url.toString(), { method: 'POST', headers: headers, body: JSON.stringify(formData) }); const response = await fetch('/api/retrieve-bundles', { method: 'POST', headers: headers, body: formData });
if (!response.ok) { if (!response.ok) {
const errorData = await response.json().catch(() => ({ message: 'Failed to parse error response.' })); const errorData = await response.json().catch(() => ({ message: 'Failed to parse error response.' }));
@ -437,6 +454,7 @@ document.addEventListener('DOMContentLoaded', () => {
} }
retrieveZipPath = response.headers.get('X-Zip-Path'); retrieveZipPath = response.headers.get('X-Zip-Path');
console.log(`Received X-Zip-Path: ${retrieveZipPath}`); console.log(`Received X-Zip-Path: ${retrieveZipPath}`);
const reader = response.body.getReader(); const reader = response.body.getReader();
const decoder = new TextDecoder(); const decoder = new TextDecoder();
let buffer = ''; let buffer = '';
@ -669,3 +687,4 @@ document.addEventListener('DOMContentLoaded', () => {
toggleFetchReferenceBundles(); toggleFetchReferenceBundles();
}); });
</script> </script>
{% endblock %}