# Base image with Python and Java FROM tomcat:10.1-jdk17 # Install build dependencies, Node.js 18, and coreutils (for stdbuf) RUN apt-get update && apt-get install -y --no-install-recommends \ python3 python3-pip python3-venv curl coreutils \ && curl -fsSL https://deb.nodesource.com/setup_18.x | bash - \ && apt-get install -y --no-install-recommends nodejs \ && rm -rf /var/lib/apt/lists/* # Install specific versions of GoFSH and SUSHI # REMOVED pip install fhirpath from this line RUN npm install -g gofsh fsh-sushi # Set up Python environment WORKDIR /app RUN python3 -m venv /app/venv ENV PATH="/app/venv/bin:$PATH" # ADDED: Uninstall old fhirpath just in case it's in requirements.txt RUN pip uninstall -y fhirpath || true # ADDED: Install the new fhirpathpy library RUN pip install --no-cache-dir fhirpathpy # Copy Flask files COPY requirements.txt . # Install requirements (including Pydantic - check version compatibility if needed) RUN pip install --no-cache-dir -r requirements.txt COPY app.py . COPY services.py . COPY forms.py . COPY package.py . COPY templates/ templates/ COPY static/ static/ COPY tests/ tests/ # Ensure /tmp, /app/h2-data, /app/static/uploads, and /app/logs are writable RUN mkdir -p /tmp /app/h2-data /app/static/uploads /app/logs && chmod 777 /tmp /app/h2-data /app/static/uploads /app/logs # Copy pre-built HAPI WAR and configuration COPY hapi-fhir-jpaserver/target/ROOT.war /usr/local/tomcat/webapps/ COPY hapi-fhir-jpaserver/target/classes/application.yaml /usr/local/tomcat/conf/ COPY hapi-fhir-jpaserver/target/classes/application.yaml /app/config/application.yaml COPY hapi-fhir-jpaserver/target/classes/application.yaml /usr/local/tomcat/webapps/app/config/application.yaml COPY hapi-fhir-jpaserver/custom/ /usr/local/tomcat/webapps/custom/ # Install supervisord RUN pip install supervisor # Configure supervisord COPY supervisord.conf /etc/supervisord.conf # Expose ports EXPOSE 5000 8080 # Start supervisord CMD ["supervisord", "-c", "/etc/supervisord.conf"]