Sudo-JHare/FHIRFLARE-IG-Toolkit
Sudo-JHare/FHIRFLARE-IG-Toolkit
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FHIRFLARE-IG-Toolkit/logs/tomcat_err.log
Sudo-JHare 4129d7ad7b HUGE RELEASE 
Added _ hapi server.
Added goFSH
added FHIR operations UI and FHIR based resful Client
Logfiles for seperate applications for persistance and log rollover

to do: advanced FSH commands
Error reporting hooks
2025-04-17 17:17:44 +10:00

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17-Apr-2025 06:25:19.367 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server version name: Apache Tomcat/10.1.40
17-Apr-2025 06:25:19.375 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server built: Apr 1 2025 17:20:53 UTC
17-Apr-2025 06:25:19.375 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server version number: 10.1.40.0
17-Apr-2025 06:25:19.375 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Name: Linux
17-Apr-2025 06:25:19.375 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Version: 5.15.167.4-microsoft-standard-WSL2
17-Apr-2025 06:25:19.375 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Architecture: amd64
17-Apr-2025 06:25:19.376 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Java Home: /opt/java/openjdk
17-Apr-2025 06:25:19.376 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Version: 17.0.14+7
17-Apr-2025 06:25:19.376 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Vendor: Eclipse Adoptium
17-Apr-2025 06:25:19.376 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_BASE: /usr/local/tomcat
17-Apr-2025 06:25:19.376 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_HOME: /usr/local/tomcat
17-Apr-2025 06:25:19.400 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.config.file=/usr/local/tomcat/conf/logging.properties
17-Apr-2025 06:25:19.401 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.manager=org.apache.juli.ClassLoaderLogManager
17-Apr-2025 06:25:19.401 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djdk.tls.ephemeralDHKeySize=2048
17-Apr-2025 06:25:19.401 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.protocol.handler.pkgs=org.apache.catalina.webresources
17-Apr-2025 06:25:19.401 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dsun.io.useCanonCaches=false
17-Apr-2025 06:25:19.401 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dorg.apache.catalina.security.SecurityListener.UMASK=0027
17-Apr-2025 06:25:19.401 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: --add-opens=java.base/java.lang=ALL-UNNAMED
17-Apr-2025 06:25:19.401 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: --add-opens=java.base/java.lang.reflect=ALL-UNNAMED
17-Apr-2025 06:25:19.401 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: --add-opens=java.base/java.io=ALL-UNNAMED
17-Apr-2025 06:25:19.401 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: --add-opens=java.base/java.util=ALL-UNNAMED
17-Apr-2025 06:25:19.401 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: --add-opens=java.base/java.util.concurrent=ALL-UNNAMED
17-Apr-2025 06:25:19.402 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: --add-opens=java.rmi/sun.rmi.transport=ALL-UNNAMED
17-Apr-2025 06:25:19.402 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.base=/usr/local/tomcat
17-Apr-2025 06:25:19.402 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.home=/usr/local/tomcat
17-Apr-2025 06:25:19.402 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.io.tmpdir=/usr/local/tomcat/temp
17-Apr-2025 06:25:19.411 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent Loaded Apache Tomcat Native library [2.0.8] using APR version [1.7.2].
17-Apr-2025 06:25:19.416 INFO [main] org.apache.catalina.core.AprLifecycleListener.initializeSSL OpenSSL successfully initialized [OpenSSL 3.0.13 30 Jan 2024]
17-Apr-2025 06:25:19.821 INFO [main] org.apache.coyote.AbstractProtocol.init Initializing ProtocolHandler ["http-nio-8080"]
17-Apr-2025 06:25:19.882 INFO [main] org.apache.catalina.startup.Catalina.load Server initialization in [794] milliseconds
17-Apr-2025 06:25:20.017 INFO [main] org.apache.catalina.core.StandardService.startInternal Starting service [Catalina]
17-Apr-2025 06:25:20.017 INFO [main] org.apache.catalina.core.StandardEngine.startInternal Starting Servlet engine: [Apache Tomcat/10.1.40]
17-Apr-2025 06:25:20.048 INFO [main] org.apache.catalina.startup.HostConfig.deployWAR Deploying web application archive [/usr/local/tomcat/webapps/ROOT.war]
17-Apr-2025 06:25:38.970 INFO [main] org.apache.jasper.servlet.TldScanner.scanJars At least one JAR was scanned for TLDs yet contained no TLDs. Enable debug logging for this logger for a complete list of JARs that were scanned but no TLDs were found in them. Skipping unneeded JARs during scanning can improve startup time and JSP compilation time.
17-Apr-2025 06:26:26.803 INFO [main] org.apache.catalina.startup.HostConfig.deployWAR Deployment of web application archive [/usr/local/tomcat/webapps/ROOT.war] has finished in [66,753] ms
17-Apr-2025 06:26:26.804 INFO [main] org.apache.catalina.startup.HostConfig.deployDirectory Deploying web application directory [/usr/local/tomcat/webapps/custom]
17-Apr-2025 06:26:26.847 INFO [main] org.apache.catalina.startup.HostConfig.deployDirectory Deployment of web application directory [/usr/local/tomcat/webapps/custom] has finished in [42] ms
17-Apr-2025 06:26:26.854 INFO [main] org.apache.coyote.AbstractProtocol.start Starting ProtocolHandler ["http-nio-8080"]
17-Apr-2025 06:26:26.893 INFO [main] org.apache.catalina.startup.Catalina.start Server startup in [67014] milliseconds
17-Apr-2025 07:05:48.360 INFO [Thread-5] org.apache.coyote.AbstractProtocol.pause Pausing ProtocolHandler ["http-nio-8080"]
17-Apr-2025 07:05:48.381 INFO [Thread-5] org.apache.catalina.core.StandardService.stopInternal Stopping service [Catalina]
17-Apr-2025 07:05:49.774 SEVERE [Thread-5] org.apache.catalina.loader.WebappClassLoaderBase.checkThreadLocalMapForLeaks The web application [ROOT] created a ThreadLocal with key of type [org.springframework.boot.SpringBootExceptionHandler.LoggedExceptionHandlerThreadLocal] (value [org.springframework.boot.SpringBootExceptionHandler$LoggedExceptionHandlerThreadLocal@60f94e9]) and a value of type [org.springframework.boot.SpringBootExceptionHandler] (value [org.springframework.boot.SpringBootExceptionHandler@46b9f0e9]) but failed to remove it when the web application was stopped. Threads are going to be renewed over time to try and avoid a probable memory leak.
17-Apr-2025 07:05:49.827 INFO [Thread-5] org.apache.coyote.AbstractProtocol.stop Stopping ProtocolHandler ["http-nio-8080"]
17-Apr-2025 07:05:49.841 INFO [Thread-5] org.apache.coyote.AbstractProtocol.destroy Destroying ProtocolHandler ["http-nio-8080"]
17-Apr-2025 07:08:07.777 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server version name: Apache Tomcat/10.1.40
17-Apr-2025 07:08:07.785 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server built: Apr 1 2025 17:20:53 UTC
17-Apr-2025 07:08:07.786 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server version number: 10.1.40.0
17-Apr-2025 07:08:07.786 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Name: Linux
17-Apr-2025 07:08:07.786 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Version: 5.15.167.4-microsoft-standard-WSL2
17-Apr-2025 07:08:07.786 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Architecture: amd64
17-Apr-2025 07:08:07.787 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Java Home: /opt/java/openjdk
17-Apr-2025 07:08:07.787 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Version: 17.0.14+7
17-Apr-2025 07:08:07.787 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Vendor: Eclipse Adoptium
17-Apr-2025 07:08:07.787 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_BASE: /usr/local/tomcat
17-Apr-2025 07:08:07.787 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_HOME: /usr/local/tomcat
17-Apr-2025 07:08:07.813 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.config.file=/usr/local/tomcat/conf/logging.properties
17-Apr-2025 07:08:07.813 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.manager=org.apache.juli.ClassLoaderLogManager
17-Apr-2025 07:08:07.814 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djdk.tls.ephemeralDHKeySize=2048
17-Apr-2025 07:08:07.814 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.protocol.handler.pkgs=org.apache.catalina.webresources
17-Apr-2025 07:08:07.814 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dsun.io.useCanonCaches=false
17-Apr-2025 07:08:07.814 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dorg.apache.catalina.security.SecurityListener.UMASK=0027
17-Apr-2025 07:08:07.814 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: --add-opens=java.base/java.lang=ALL-UNNAMED
17-Apr-2025 07:08:07.815 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: --add-opens=java.base/java.lang.reflect=ALL-UNNAMED
17-Apr-2025 07:08:07.815 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: --add-opens=java.base/java.io=ALL-UNNAMED
17-Apr-2025 07:08:07.815 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: --add-opens=java.base/java.util=ALL-UNNAMED
17-Apr-2025 07:08:07.815 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: --add-opens=java.base/java.util.concurrent=ALL-UNNAMED
17-Apr-2025 07:08:07.815 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: --add-opens=java.rmi/sun.rmi.transport=ALL-UNNAMED
17-Apr-2025 07:08:07.815 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.base=/usr/local/tomcat
17-Apr-2025 07:08:07.815 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.home=/usr/local/tomcat
17-Apr-2025 07:08:07.815 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.io.tmpdir=/usr/local/tomcat/temp
17-Apr-2025 07:08:07.826 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent Loaded Apache Tomcat Native library [2.0.8] using APR version [1.7.2].
17-Apr-2025 07:08:07.831 INFO [main] org.apache.catalina.core.AprLifecycleListener.initializeSSL OpenSSL successfully initialized [OpenSSL 3.0.13 30 Jan 2024]
17-Apr-2025 07:08:08.209 INFO [main] org.apache.coyote.AbstractProtocol.init Initializing ProtocolHandler ["http-nio-8080"]
17-Apr-2025 07:08:08.251 INFO [main] org.apache.catalina.startup.Catalina.load Server initialization in [759] milliseconds
17-Apr-2025 07:08:08.340 INFO [main] org.apache.catalina.core.StandardService.startInternal Starting service [Catalina]
17-Apr-2025 07:08:08.340 INFO [main] org.apache.catalina.core.StandardEngine.startInternal Starting Servlet engine: [Apache Tomcat/10.1.40]
17-Apr-2025 07:08:08.368 INFO [main] org.apache.catalina.startup.HostConfig.deployWAR Deploying web application archive [/usr/local/tomcat/webapps/ROOT.war]
17-Apr-2025 07:08:22.061 INFO [main] org.apache.jasper.servlet.TldScanner.scanJars At least one JAR was scanned for TLDs yet contained no TLDs. Enable debug logging for this logger for a complete list of JARs that were scanned but no TLDs were found in them. Skipping unneeded JARs during scanning can improve startup time and JSP compilation time.
17-Apr-2025 07:09:08.525 INFO [main] org.apache.catalina.startup.HostConfig.deployWAR Deployment of web application archive [/usr/local/tomcat/webapps/ROOT.war] has finished in [60,155] ms
17-Apr-2025 07:09:08.528 INFO [main] org.apache.catalina.startup.HostConfig.deployDirectory Deploying web application directory [/usr/local/tomcat/webapps/custom]
17-Apr-2025 07:09:08.565 INFO [main] org.apache.catalina.startup.HostConfig.deployDirectory Deployment of web application directory [/usr/local/tomcat/webapps/custom] has finished in [37] ms
17-Apr-2025 07:09:08.575 INFO [main] org.apache.coyote.AbstractProtocol.start Starting ProtocolHandler ["http-nio-8080"]
17-Apr-2025 07:09:08.662 INFO [main] org.apache.catalina.startup.Catalina.start Server startup in [60427] milliseconds
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