mirror of
https://github.com/Sudo-JHare/FHIRFLARE-IG-Toolkit.git
synced 2025-06-14 12:10:03 +00:00
Sudo-JHare
8e769bd126
operation UI fixes, CRSF token handling for security internally Fhirpath added to IG processing view explicit removal of narrative views in the ig viewer changes to enforce hapi server config is read. added Prism for code highlighting in the Base and ui operations
56 lines
2.0 KiB
Docker
56 lines
2.0 KiB
Docker
# Base image with Python and Java
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FROM tomcat:10.1-jdk17
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# Install build dependencies, Node.js 18, and coreutils (for stdbuf)
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RUN apt-get update && apt-get install -y --no-install-recommends \
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python3 python3-pip python3-venv curl coreutils \
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&& curl -fsSL https://deb.nodesource.com/setup_18.x | bash - \
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&& apt-get install -y --no-install-recommends nodejs \
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&& rm -rf /var/lib/apt/lists/*
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# Install specific versions of GoFSH and SUSHI
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# REMOVED pip install fhirpath from this line
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RUN npm install -g gofsh fsh-sushi
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# Set up Python environment
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WORKDIR /app
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RUN python3 -m venv /app/venv
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ENV PATH="/app/venv/bin:$PATH"
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# ADDED: Uninstall old fhirpath just in case it's in requirements.txt
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RUN pip uninstall -y fhirpath || true
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# ADDED: Install the new fhirpathpy library
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RUN pip install --no-cache-dir fhirpathpy
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# Copy Flask files
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COPY requirements.txt .
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# Install requirements (including Pydantic - check version compatibility if needed)
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RUN pip install --no-cache-dir -r requirements.txt
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COPY app.py .
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COPY services.py .
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COPY forms.py .
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COPY templates/ templates/
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COPY static/ static/
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COPY tests/ tests/
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# Ensure /tmp, /app/h2-data, /app/static/uploads, and /app/logs are writable
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RUN mkdir -p /tmp /app/h2-data /app/static/uploads /app/logs && chmod 777 /tmp /app/h2-data /app/static/uploads /app/logs
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# Copy pre-built HAPI WAR and configuration
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COPY hapi-fhir-jpaserver/target/ROOT.war /usr/local/tomcat/webapps/
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COPY hapi-fhir-jpaserver/target/classes/application.yaml /usr/local/tomcat/conf/
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COPY hapi-fhir-jpaserver/target/classes/application.yaml /app/config/application.yaml
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COPY hapi-fhir-jpaserver/target/classes/application.yaml /usr/local/tomcat/webapps/app/config/application.yaml
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COPY hapi-fhir-jpaserver/custom/ /usr/local/tomcat/webapps/custom/
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# Install supervisord
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RUN pip install supervisor
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# Configure supervisord
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COPY supervisord.conf /etc/supervisord.conf
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# Expose ports
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EXPOSE 5000 8080
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# Start supervisord
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CMD ["supervisord", "-c", "/etc/supervisord.conf"] |