mirror of
https://github.com/Sudo-JHare/FHIRFLARE-IG-Toolkit.git
synced 2025-09-17 18:35:02 +00:00
Sudo-JHare
236390e57b
Remove Hapi validaotr replace with Hl7 Validator restructure validation report provide Json and Html validation reports remove hardcoded local references and couple to ENV allowing custom env Fhir Server URl to be set for local ""instance:
68 lines
2.4 KiB
Docker
68 lines
2.4 KiB
Docker
# Base image with Python and Java
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FROM tomcat:10.1-jdk17
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# Install build dependencies, Node.js 18, and coreutils (for stdbuf)
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RUN apt-get update && apt-get install -y --no-install-recommends \
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python3 python3-pip python3-venv curl coreutils \
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&& curl -fsSL https://deb.nodesource.com/setup_18.x | bash - \
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&& apt-get install -y --no-install-recommends nodejs \
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&& rm -rf /var/lib/apt/lists/*
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# Install specific versions of GoFSH and SUSHI
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# REMOVED pip install fhirpath from this line
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RUN npm install -g gofsh fsh-sushi
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# ADDED: Download the latest HL7 FHIR Validator CLI
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RUN mkdir -p /app/validator_cli
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WORKDIR /app/validator_cli
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# Download the validator JAR and a separate checksum file for verification
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RUN curl -L -o validator_cli.jar "https://github.com/hapifhir/org.hl7.fhir.core/releases/latest/download/validator_cli.jar"
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# Set permissions for the downloaded file
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RUN chmod 755 validator_cli.jar
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# Change back to the main app directory for the next steps
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WORKDIR /app
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# Set up Python environment
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WORKDIR /app
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RUN python3 -m venv /app/venv
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ENV PATH="/app/venv/bin:$PATH"
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# ADDED: Uninstall old fhirpath just in case it's in requirements.txt
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RUN pip uninstall -y fhirpath || true
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# ADDED: Install the new fhirpathpy library
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RUN pip install --no-cache-dir fhirpathpy
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# Copy Flask files
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COPY requirements.txt .
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# Install requirements (including Pydantic - check version compatibility if needed)
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RUN pip install --no-cache-dir -r requirements.txt
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COPY app.py .
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COPY services.py .
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COPY forms.py .
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COPY package.py .
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COPY templates/ templates/
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COPY static/ static/
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COPY tests/ tests/
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# Ensure /tmp, /app/h2-data, /app/static/uploads, and /app/logs are writable
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RUN mkdir -p /tmp /app/h2-data /app/static/uploads /app/logs && chmod 777 /tmp /app/h2-data /app/static/uploads /app/logs
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# Copy pre-built HAPI WAR and configuration
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COPY hapi-fhir-jpaserver/target/ROOT.war /usr/local/tomcat/webapps/
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COPY hapi-fhir-jpaserver/target/classes/application.yaml /usr/local/tomcat/conf/
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COPY hapi-fhir-jpaserver/target/classes/application.yaml /app/config/application.yaml
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COPY hapi-fhir-jpaserver/target/classes/application.yaml /usr/local/tomcat/webapps/app/config/application.yaml
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COPY hapi-fhir-jpaserver/custom/ /usr/local/tomcat/webapps/custom/
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# Install supervisord
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RUN pip install supervisor
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# Configure supervisord
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COPY supervisord.conf /etc/supervisord.conf
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# Expose ports
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EXPOSE 5000 8080
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# Start supervisord
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CMD ["supervisord", "-c", "/etc/supervisord.conf"] |